2024 Heart single cell database

Heart single cell database

Author: quvd

August undefined, 2024

Web3 de oct. de 2024 · In conclusion, we have created a compendium of single-cell transcriptional measurements across 20 mouse organs. This Tabula Muris, or ‘Mouse Atlas’, has many uses, including the discovery of ... WebThe Human Transcriptome Cell Atlas (HTCA) database provides a one-stop interactive query to single-cell transcriptomics, single-cell splicing variants, spatial transcriptomics, and single-cell ATAC-sequencing profiles of adult and fetal tissues. Online analysis tools are also provided.

Cell-omics Data Coordinate Platform - CDCP - 单细胞组学平台

Web19 de mar. de 2024 · Using single-cell and spatial transcriptomics in chicken hearts, here, the authors generate a census of cellular interactions from early to late four-chambered … Web31 de ene. de 2024 · Sorting single cells from the adult heart. A, Schematic representation of the heart and all main cardiac cell types. B, Work flow of the protocol. C, Gating strategy to sort single cells based on different scatter properties. ... (Database I in the online-only Data Supplement). integrity auctioneers harvey nd

Single-cell transcriptome analysis of the zebrafish embryonic …

WebResults: We sequenced the transcriptomes of 287,269 single cardiac nuclei, revealing a total of 9 major cell types and 20 subclusters of cell types within the human heart. Cellular subclasses include two distinct groups of resident macrophages, four endothelial subtypes, and two fibroblasts subsets. WebThis chapter describes a pipeline for basic bioinformatics analysis of single-cell sequencing data (see Chap. 10: Single-Cell Library Preparation). Starting with raw sequencing data, we describe how to quality check samples, to create an index from a reference genome, to align the sequences to an index, and to quantify transcript abundances. WebSingle nuclei captured most of the cardiomyocytes, fibroblasts and adipocytes; whereas single cell/CD45+enriched single cell capture most of the vascular and immune cells. … integrity at workplace

Single Cell Portal

WebSingle-cell reconstruction of the adult human heart during heart failure and recovery reveals the cellular landscape underlying cardiac function Single-cell reconstruction of … Web19 de nov. de 2024 · Cardiac progenitor cells (CPCs) form cardiomyocytes, pericytes, smooth muscle and endothelial cells during embryonic development. Here, the authors characterize mouse CPCs marked by Nkx2.5 and ... integrity at workplace pptWeb4 de feb. de 2024 · The study is among the first to leverage big data, single-cell sequencing, and genomics to find new drug targets in heart disease. It’s a perfect example of the type of translational research that Khomtchouk sees as pivotal to the development of cardioinformatics, a field he brought into view by coining the term cardioinformatics in a … integrity auction gonzales tx

"WebEach of the tabs allows exploring the data presented in the manuscript. Videos: 3D volume rendering videos are available for a selection of marker genes. The one in this page … " - Heart single cell database

Heart single cell database

hbCOR – The Premier Database for Health Care

WebThe annotation is based on overrepresentation analysis towards biological databases, including Gene Ontology, Reactome, PanglaoDB, TRRUST, and KEGG, as well as HPA classifications including subcellular location, protein class, secretion location and classification, and specificity toward tissues, single cell types, immune cells, brain … WebSingle-cell map of diverse immune phenotypes in the breast tumor microenvironment. Cell. 2024; 174:1293–1308.e36. doi: 10.1016/j.cell.2024.05.060 Crossref Medline Google Scholar; 25. Butler A, Hoffman P, Smibert P, Papalexi E, Satija R. Integrating single-cell transcriptomic data across different conditions, technologies, and species. Nat ...

Did you know?

Web2 de oct. de 2024 · The pathology of CVDs could be related to the functional abnormalities of multiple cell types in the heart. Single-cell RNA sequencing (scRNA-seq) technology … http://betsholtzlab.org/Publications/databases.html

WebThe HCA Data Portal stores and provides single-cell data contributed by labs around the world. Anyone can contribute data, find data, or access community tools and … Web5 de oct. de 2024 · Moreover, the known cell marks are extremely valuable to single-cell sequencing studies, in which they were widely used to label cell types for individual cells, enabling capture of the initial viewing of cell compositions. However, there is no database available for cell markers identified by single-cell RNA sequencing and experimental …

Web6 de sept. de 2024 · Single-cell atlas of left ventricle revealed the changes of cell proportion ... Major cell types in heart, included CM, EC ... Heart disease-related gene sets and myocardial fibrosis gene sets were downloaded from the DisGeNET database . Cell-cell communication analysis. To identify cell–cell communication in ... Web4 de feb. de 2024 · With former Capstone students, he was building a database that aimed to collect all the existing single-cell genomic data relevant to cardiovascular disease. …

Web4 de ago. de 2024 · Using large-scale single nuclei RNA sequencing, we defined the transcriptional and cellular diversity in the normal human heart. Our identification of …

Web6 de nov. de 2024 · Single-cell RNA sequencing (scRNA-seq) technology is a powerful, rapidly developing tool for characterizing individual cells and elucidating biological … joe perry and wifeWeb28 de nov. de 2024 · To facilitate discovery with published single-cell transcriptomics data, we have assembled a near exhaustive, manually curated database of single-cell … joe pera white oak music hallWeb24 de sept. de 2024 · NEW YORK – Researchers have generated a molecular and cellular atlas of the human heart based on single-cell and single-nuclei transcriptome data. To gain better insight into the makeup of the healthy heart, an international team of researchers generated transcriptome data from hundreds of thousands of cells from half a dozen … joe perry and steve perryWebThe HCL database contains data visualization resources of 102 human cell types and 843 cell subtypes identified from 702,968 single-cell transcriptome data, and the scHCL can … integrity auction hibidWebCell type proteome. GENERAL INFORMATIONi. General description of the gene and the encoded protein (s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project. Gene namei. Official gene symbol, which is typically a short form of the gene name, according to HGNC. CTSG. joe perry custom shop single pickup les paulWebWe provide these database resources freely for academic and other non-commercial purposes. We encourage reproduction of data excerpts from the database in academic publications on the condition that it is cited with the respective references to the original publications and the database websites. integrity at workplace quotesWeb4 de jun. de 2024 · June 4, 2024. Credit: Bridget Simonson, Broad Institute. The human heart has a diversity of cell types, including cardiomyocytes (green) and fibroblasts (yellow). DNA is stained blue. The study of individual cells has vastly expanded the biological understanding of various organ systems, but in cardiac research, some basic questions … integrity auction and sales